Welcome !

ProteINSIDE is a new workflow to analyse lists of protein or gene identifiers from ruminant species and gather biological information provided by functional annotations, putative secretion of proteins and proteins interactions networks. ProteINSIDE gets results from several software and databases with a single query. From a unique list, ProteINSIDE uses orthologs identifiers within well studied species (Human, Rat or Mouse) to extend analyses and biological information retrieval.


Here are the species that can be used with this webservice: BOVINE, HUMAN, RAT, MOUSE, GOAT and SHEEP.

Please cite ProteINSIDE:

  • 2015 - Kaspric N, Picard B, Reichstadt M, Tournayre J, and Bonnet M.
    ProteINSIDE to Easily Investigate Proteomics Data from Ruminants: Application to Mine Proteome of Adipose and Muscle Tissues in Bovine Foetuses.
    PLoS ONE 10(5): e0128086. doi:10.1371/journal.pone.0128086 -/- PubMed (PMID: 26000831)
  • 2015 - Nicolas Kaspric, Matthieu Reichstadt, Brigitte Picard, Jérémy Tournayre, and Muriel Bonnet
    Protein Function Easily Investigated by Genomics Data Mining Using the ProteINSIDE Online Tool.
    Genomics and Computational Biology, [S.l.], v. 1, n. 1, p. e16, sep. 2015. ISSN 2365-7154. Available at: PDF. Date accessed: 21 Sep. 2015.

View all ProteINSIDE's citations : here.



TUTORIALS FOR BEGINNERS: -|- Please subscribe and get private user interface !


Latest news: 28th of January 2016 (read).

Current version of ProteINSIDE: here.

For better performance we recommand to use Google Chrome or Firefox or Internet Explorer 8+ as internet browser. ProteINSIDE works also on mobile and tablet (iOS and Android).


Example:

Here you can use this "SAMPLE" analysis to view each part of a basic proteins dataset analysis.
This sample is made of 133 proteins (1 duplicate): 34 proteins related to the glycolysis cycle, 11 proteins from the respiratory chain, 5 proteins from the tricarboxylic acid cycle, 79 hormones or secreted proteins, and proteins with very specific functions unrelated to the others.

You can find more informations about: Results sections, webservice modules, type of analysis... on the "Tutorials" section.




Visitor map / ProteINSIDE activity

ProteINSIDE has already analysed 125278 unique proteins.